Upload a FASTQ File

1. Go to Samples view via the main navigation bar

   

2. Click Files in the left sidebar to go to the sample read file manager

   

3. Upload a FASTQ read file

4. Return to the Samples view

   

5. Click the button to open the sample creation dialog

   The file you uploaded should now be available in file list.

   

Create a Sample

1. Click the button to open the sample creation dialog

   

2. Fill out the fields in the sample creator

   Only the sample name, default subtraction, and one or two read files are required.

   

3. Click the Save button

   You should immediately see a placeholder for your sample in the Samples view. The spinner indicates that the sample is still being created.

   

   When the sample creation process is finished your sample will look something like this:

   

4. Click on the sample when it is ready

   You will be able to see some information about your sample that was calculated during the creation process.

   

5. Click the Quality tab

   This will display a quality assessment for the sample generated using FastQC.