Account Updated May 3, 2022

These endpoints allow management of the user account associated with the current session or API key. Unauthorized clients will receive for calls to all account endpoints.

Get

Get the complete respresentation for the account associated with the current session or API key.

GET /api/account

Example

GET /api/account

Response

Status: 200 OK

{
    "administrator": true,
    "groups": [],
    "identicon": "6be6d0a72a16cb633144ec03cdaef77804c6f94770184f83e0899fe6bdcb77ee",
    "settings": {
        "skip_quick_analyze_dialog": true,
        "show_ids": false,
        "show_versions": false,
        "quick_analyze_algorithm": "pathoscope_bowtie"
    },
    "permissions": {
        "cancel_job": true,
        "create_ref": true,
        "create_sample": true,
        "modify_hmm": true,
        "modify_subtraction": true,
        "remove_file": true,
        "remove_job": true,
        "upload_file": true
    },
    "primary_group": "",
    "last_password_change": "2018-04-27T22:49:11.654000Z",
    "email": "[email protected]",
    "id": "igboyes"
}

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key

Edit

Change the email address associated with the account associated with the current session or API key.

PATCH /api/account

Input

Name Type Required Description
email string false an email address
old_password string false the old password for verification
new_password string false the new password

Example

PATCH /api/account 
{
    "email": "[email protected]"
}

Response

Status: 200 OK

{
    "administrator": true,
    "groups": [],
    "identicon": "6be6d0a72a16cb633144ec03cdaef77804c6f94770184f83e0899fe6bdcb77ee",
    "settings": {
        "skip_quick_analyze_dialog": true,
        "show_ids": false,
        "show_versions": false,
        "quick_analyze_algorithm": "pathoscope_bowtie"
    },
    "permissions": {
        "cancel_job": true,
        "create_ref": true,
        "create_sample": true,
        "modify_hmm": true,
        "modify_subtraction": true,
        "remove_file": true,
        "remove_job": true,
        "upload_file": true
    },
    "primary_group": "",
    "last_password_change": "2018-04-27T22:49:11.654000Z",
    "email": "[email protected]",
    "id": "igboyes"
}

Errors

Status Message Reason
400 Invalid old password supplied old password is invalid
401 Requires authorization request is not associated with an authorized session or API key
422 Invalid input email address is invalid or password fields are missing or invalid
401 Requires authorization request is not associated with an authorized session or API key

Get Settings

Get the settings for the account associated with the current session or API key.

GET /api/account/settings

Example

GET /api/account/settings

Response

Status: 200 OK

{
    "skip_quick_analyze_dialog": true,
    "show_ids": false,
    "show_versions": false,
    "quick_analyze_algorithm": "pathoscope_bowtie"
}

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key

Edit Settings

Update the settings for the account associated with the current session or API key. All fields are optional.

PATCH /api/account/settings

Input

Name Type Description
quick_analyze_algorithm string algorithm to use for quick analysis
skip_quick_analyze_dialog boolean don’t show the quick analysis dialog
show_ids boolean show document ids in client in where possible
show_versions boolean show document versions in client where possible

Example

PATCH /api/account/settings 
{
    "show_ids": true
}

Response

Status: 200 OK

{
    "skip_quick_analyze_dialog": true,
    "show_ids": true,
    "show_versions": false,
    "quick_analyze_algorithm": "pathoscope_bowtie"
}

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key
422 Invalid input invalid settings key or value

Get API Keys

List all API keys for the active account. The keys themselves are not returned.

GET /api/account/keys

Example

GET /api/account/keys

Response

Status: 200 OK

[
    {
        "id": "test_0",
        "name": "Test",
        "administrator": true,
        "groups": [],
        "permissions": {
            "cancel_job": true,
            "create_ref": true,
            "create_sample": true,
            "modify_hmm": true,
            "modify_subtraction": true,
            "remove_file": true,
            "remove_job": true,
            "upload_file": true
        },
        "created_at": "2018-05-01T19:47:03.334000Z"
    }
]

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key

Create API Key

Create a new API key with the provided permissions. The response to this request is the only time the key string will be returned by the API.

POST /api/account/keys

Input

Name Type Required Description
name string true a non-unique name for the API key
administrator boolean false sets administrative rights on the API key (default=false)
permissions object false an object describing the permissions the new key will have. Any unset permissions will default to false

Example

POST /api/account/keys 
{
    "name": "Test 2",
    "permissions": {
        "create_sample": true
    }
}

Response

Status: 201 Created

{
    "id": "test 2_0",
    "name": "Test 2",
    "administrator": false,
    "groups": [],
    "permissions": {
        "cancel_job": false,
        "create_ref": false,
        "create_sample": true,
        "modify_hmm": false,
        "modify_subtraction": false,
        "remove_file": false,
        "remove_job": false,
        "upload_file": false
    },
    "created_at": "2018-05-01T21:34:21.271000Z",
    "key": "3f80126f767e48099bdd5a3704bf8453"
}

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key
422 Invalid input missing or invalid value or permissions object

Edit API Key

Change the permissions of an existing API key.

PATCH /api/account/keys/:id

Input

Name Type Required Description
administrator boolean false sets administrative rights on the API key
permissions object false an object describing updates to the key’s permissions

Example

PATCH /api/account/keys/test%202_0 
{
    "administrator": true,
    "permissions": {
        "modify_subtraction": true
    }
}

Response

Status: 200 OK

{
    "id": "test 2_0",
    "name": "Test 2",
    "administrator": true,
    "groups": [],
    "permissions": {
        "cancel_job": false,
        "create_ref": false,
        "create_sample": true,
        "modify_hmm": false,
        "modify_subtraction": true,
        "remove_file": false,
        "remove_job": false,
        "upload_file": false
    },
    "created_at": "2018-05-01T21:34:21.271000Z"
}

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key
404 Not found API key identified by :id does not exist
422 Invalid input missing or invalid permissions object

Delete API Key

Delete an existing API key.

DELETE /api/account/keys/:id

Example

DELETE /api/account/keys/test_1

Response

Status: 204 No content

Errors

Status Message Reason
401 Requires authorization request is not associated with an authorized session or API key
404 Not found API key identified by :id does not exist

Logout

Logout by invalidating the current session. It will have no effect for connections authenticated with an API key.

GET /api/account/logout

Response

Status: 204 No Content

Errors

None

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